MolNFT v1 · #94251 · protein
Structure of a putative acyl-CoA dehydrogenase from mycobacterium abscessus
4HR3: “Structure of a putative acyl-CoA dehydrogenase from mycobacterium abscessus”. X-ray diffraction, 1 ligand (FAD), 3 pockets (best druggability 0.85). MolNFT v1 #94251 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4HR3
- Type
- protein
- Length
- 407 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative acyl-CoA dehydrogenase
- UniProt
- B1MFF5
- Ligands
- FAD
- Pockets
- 3 · best druggability 0.85
Structure
x-ray diffraction · 1 distinct chain · 53% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative acyl-CoA dehydrogenase | protein | 407 | 53% helix, 15% strand | B1MFF5 |
Ligands and binding sites
- FAD · Flavin-adenine dinucleotide · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1115 | 0.85 | 0.86 | 102 | FAD |
| 2 | 121 | 0.42 | 0.76 | 21 | empty |
| 3 | 69 | 0.29 | 0.72 | 15 | empty |
Compared structures
- 4HR3 · Structure of a putative acyl-CoA dehydrogenase from Mycobacterium abscessus · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1MFF5
- Elsewhere: RCSB PDB 4HR3 · PDBe 4HR3 · UniProt B1MFF5
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