MolNFT v1 · #93557 · protein

High-resolution crystal structure of legionella pneumophila lida (60- 594)

4H5Y · Lida protein, substrate of the DOT/ICM system: “High-resolution crystal structure of legionella pneumophila lida (60- 594)”. X-ray diffraction, 8 pockets (best druggability 0.58). MolNFT v1 #93557 on GenesisL1: 3D structure, binding…

PDB: 4H5Y
Type: protein
Length: 528 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Lida protein, substrate of the DOT/ICM system
UniProt: A5IFX1
Pockets: 8 · best druggability 0.58

Structure

x-ray diffraction · 1 distinct chain · 66% helix, 11% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Lida protein, substrate of the DOT/ICM system	protein	528	66% helix, 11% strand	A5IFX1

Pockets

8 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	86	0.58	0.87	16	empty
2	98	0.45	0.79	25	empty
3	83	0.41	0.79	18	empty
4	68	0.32	0.75	15	empty
5	58	0.31	0.76	13	empty

Compared structures

4H5Y · High-resolution crystal structure of Legionella pneumophila LidA (60-594) · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A5IFX1
Elsewhere: RCSB PDB 4H5Y · PDBe 4H5Y · UniProt A5IFX1

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