MolNFT v1 · #93418 · protein
Crystal structure of a phosphate ABC transporter, phosphate-binding protein (SP_2084) from streptococcus pneumoniae TIGR4 at 1.77 a resolution
4H1X · Phosphate-binding protein psts 2: “Crystal structure of a phosphate ABC transporter, phosphate-binding protein (SP_2084) from streptococcus…”. X-ray diffraction, 1 ligand (CL), 3 pockets (best druggability 0.37). MolNFT v1 #93418 on…
- PDB
- 4H1X
- Type
- protein
- Length
- 257 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Phosphate-binding protein psts 2
- UniProt
- P0C2M5
- Ligands
- CL
- Pockets
- 3 · best druggability 0.37
Structure
x-ray diffraction · 1 distinct chain · 35% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphate-binding protein psts 2 | protein | 257 | 35% helix, 29% strand | P0C2M5 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 134 | 0.37 | 0.73 | 23 | empty |
| 2 | 110 | 0.37 | 0.74 | 20 | CIT |
| 3 | 59 | 0.29 | 0.74 | 14 | empty |
Modifications
Observed in the structure: 3 modified (engineered).
Compared structures
- 4H1X · Crystal structure of a phosphate ABC transporter, phosphate-binding protein (SP_2084)… · the same entry in another collection · chain A against A, TM-score 1.00
- P0C2M5 · AlphaFold monomer V2.0 prediction for phosphate-binding protein psts 2 (P0C2M5) · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0C2M5
- Elsewhere: RCSB PDB 4H1X · PDBe 4H1X · UniProt P0C2M5
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