MolNFT v1 · #93224 · protein
Crystal structure of the lipase from proteus mirabilis
4GW3 · Putative lipase: “Crystal structure of the lipase from proteus mirabilis”. X-ray diffraction, 1 ligand (CA), 1 pocket (best druggability 0.80). MolNFT v1 #93224 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4GW3
- Type
- protein
- Length
- 284 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative lipase
- EC
- 3.1.1.3
- UniProt
- B4EVM3
- Ligands
- CA
- Pockets
- 1 · best druggability 0.80
Structure
x-ray diffraction · 1 distinct chain · 47% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative lipase (EC 3.1.1.3) | protein | 284 | 47% helix, 15% strand | B4EVM3 |
Ligands and binding sites
- CA · Calcium ion · metal · 2 copies · chains A
- 1PE · Pentaethylene glycol · additive · 2 copies · chains A
- IPA · Isopropyl alcohol · additive · chains A
- GOL · Glycerol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 395 | 0.80 | 0.89 | 33 | IPA, 1PE |
Compared structures
- 4GW3 · Crystal Structure of the Lipase from Proteus mirabilis · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B4EVM3
- Elsewhere: RCSB PDB 4GW3 · PDBe 4GW3 · UniProt B4EVM3
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