MolNFT v1 · #92871 · protein
Crystal structure of the blue-light absorbing form of the thermosynechococcus elongatus pixj gaf-domain
4GLQ · Methyl-accepting chemotaxis protein: “Crystal structure of the blue-light absorbing form of the thermosynechococcus elongatus pixj gaf-domain”. X-ray diffraction, 1 ligand (VRB), 1 pocket (best druggability 0.69). MolNFT v1 #92871…
- PDB
- 4GLQ
- Type
- protein
- Length
- 149 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Methyl-accepting chemotaxis protein
- UniProt
- Q8DLC7
- Ligands
- VRB
- Pockets
- 1 · best druggability 0.69
Structure
x-ray diffraction · 1 distinct chain · 42% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Methyl-accepting chemotaxis protein | protein | 149 | 42% helix, 28% strand | Q8DLC7 |
Ligands and binding sites
- VRB · Phycoviolobilin, blue light-absorbing form · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 189 | 0.69 | 0.86 | 24 | VRB |
Modifications
Observed in the structure: 2 covalent (covalent ligand).
Compared structures
- 4GLQ · Crystal Structure of the blue-light absorbing form of the Thermosynechococcus elongatus… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8DLC7
- Elsewhere: RCSB PDB 4GLQ · PDBe 4GLQ · UniProt Q8DLC7
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