MolNFT v1 · #92237 · protein

Group B streptococcus pilus island 1 sortase C2

4G1H · Sortase family protein: “Group B streptococcus pilus island 1 sortase C2”. X-ray diffraction, 1 ligand (CA), 1 pocket (best druggability 0.26). MolNFT v1 #92237 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 4G1H
Type: protein
Length: 176 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Sortase family protein
UniProt: Q8E0S6
Ligands: CA
Pockets: 1 · best druggability 0.26

Structure

x-ray diffraction · 1 distinct chain · 20% helix, 34% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Sortase family protein	protein	176	20% helix, 34% strand	Q8E0S6

Ligands and binding sites

CA · Calcium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	51	0.26	0.73	12	empty

Compared structures

4G1H · Group B Streptococcus Pilus Island 1 Sortase C2 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8E0S6
Elsewhere: RCSB PDB 4G1H · PDBe 4G1H · UniProt Q8E0S6

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