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MolNFT v1 · #91409 · protein

K234R: apo structure of inhibitor resistant beta-lactamase

4FCF · Beta-lactamase shv-1: “K234R: apo structure of inhibitor resistant beta-lactamase”. X-ray diffraction, 2 ligands (MA4, TAU), 2 pockets (best druggability 0.69). MolNFT v1 #91409 on GenesisL1: 3D structure, binding sites and pockets…

PDB
4FCF
Type
protein
Length
265 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Beta-lactamase shv-1
EC
3.5.2.6
UniProt
P0AD64
Ligands
MA4, TAU
Pockets
2 · best druggability 0.69

Structure

x-ray diffraction · 1 distinct chain · 46% helix, 17% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ABeta-lactamase shv-1 (EC 3.5.2.6)protein26546% helix, 17% strandP0AD64

Ligands and binding sites

  • MA4 · Cyclohexyl-hexyl-beta-D-maltoside · ligand · 2 copies · chains A
  • TAU · 2-aminoethanesulfonic acid · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
12150.690.8524MA4
2570.280.7515TAU

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

  • 4FCF · K234R: apo structure of inhibitor resistant beta-lactamase · the same entry in another collection · chain A against A, TM-score 1.00
  • P0AD64 · AlphaFold monomer V2.0 prediction for beta-lactamase shv-1 (P0AD64) · a predicted model of the same protein · chain A against A, TM-score 0.98

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