MolNFT v1 · #89980 · RNA
Crystal structure of 19MER double-helical RNA containing CUG/CGG- repeats
4E5C · 5'-R(P*GP*GP*CP*GP*GP*CP*GP*GP*CP*GP*GP*CP*UP*GP*CP*UP*GP*C…: “Crystal structure of 19MER double-helical RNA containing CUG/CGG- repeats”. X-ray diffraction, 1 pocket (best druggability 0.31). MolNFT v1 #89980 on GenesisL1: 3D…
- PDB
- 4E5C
- Type
- RNA
- Length
- 38 nucleotides
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 5'-R(P*GP*GP*CP*GP*GP*CP*GP*GP*CP*GP*GP*CP*UP*GP*CP*UP*GP*C P*C)-3'
- Pockets
- 1 · best druggability 0.31
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | 5'-R(P*GP*GP*CP*GP*GP*CP*GP*GP*CP*GP*GP*CP*UP*GP*CP*UP*GP*C P*C)-3' | rna | 19 | — | — |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 106 | 0.31 | 0.72 | 12 | empty |
Interfaces
1 interface between chains.
- A–B · 984 Ų buried · 82 hydrogen bonds · nucleic-nucleic
Compared structures
- 4E5C · Crystal Structure of 19mer double-helical RNA containing CUG/CGG-repeats · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 4E5C · PDBe 4E5C
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