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MolNFT v1 · #89266 · protein + DNA

Crystal structure of MBD4 catalytic domain bound to abasic DNA

4DK9: “Crystal structure of MBD4 catalytic domain bound to abasic DNA”. X-ray diffraction. MolNFT v1 #89266 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
4DK9
Type
protein + DNA
Length
162 residues
Chains
3
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
O95243

Structure

x-ray diffraction · 3 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
B—dna11——
C—dna11——
A—protein140—O95243

Compared structures

  • 4DK9 · Crystal Structure of MBD4 Catalytic Domain Bound to Abasic DNA · the same entry in another collection · chain B against B, TM-score 1.00
  • O95243 · AlphaFold monomer V2.0 prediction for methyl-cpg-binding domain protein 4 (O95243) · a predicted model of the same protein · chain A against A, TM-score 0.99

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