MolNFT v1 · #8839 · protein
NMR structure of the human src SH2 domain complex
1HCT · Acetyl-pyeeie-oh: “NMR structure of the human src SH2 domain complex”. Solution nmr, 1 ligand (ACE). MolNFT v1 #8839 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1HCT
- Type
- protein
- Length
- 112 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Acetyl-pyeeie-oh; Human src
- UniProt
- P12931
- Ligands
- ACE
Structure
solution nmr · 2 distinct chains · 17% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Acetyl-pyeeie-oh | protein | 5 | 0% helix, 0% strand | — |
| B | Human src | protein | 107 | 18% helix, 33% strand | P12931 |
Ligands and binding sites
- ACE · Acetyl group · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 460 Ų buried · 9 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 1 covalent, 1 modified (covalent ligand, phosphorylation).
Compared structures
- 1HCT · NMR structure of the human src SH2 domain complex · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P12931
- Elsewhere: RCSB PDB 1HCT · PDBe 1HCT · UniProt P12931
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