MolNFT v1 · #88038 · protein
Crystal structure of the first bacterial vanadium dependant iodoperoxidase
4CIT · Vanadium-dependent haloperoxidase: “Crystal structure of the first bacterial vanadium dependant iodoperoxidase”. X-ray diffraction, 2 ligands (VO4, NA), 1 pocket (best druggability 0.51). MolNFT v1 #88038 on GenesisL1: 3D structure…
- PDB
- 4CIT
- Type
- protein
- Length
- 410 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Vanadium-dependent haloperoxidase
- EC
- 1.11.1.-, 1.11.1.8
- UniProt
- G0LAH5
- Ligands
- VO4, NA
- Pockets
- 1 · best druggability 0.51
Structure
x-ray diffraction · 1 distinct chain · 58% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Vanadium-dependent haloperoxidase (EC 1.11.1.-, 1.11.1.8) | protein | 410 | 58% helix, 2% strand | G0LAH5 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 88 | 0.51 | 0.83 | 18 | empty |
Modifications
Observed in the structure: 1 modified (oxidation).
Compared structures
- 4CIT · Crystal structure of the first bacterial vanadium dependant iodoperoxidase · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt G0LAH5
- Elsewhere: RCSB PDB 4CIT · PDBe 4CIT · UniProt G0LAH5
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