MolNFT v1 · #86837 · protein

Threading model of the T7 large terminase within the GP8GP19 complex

4BIL · DNA maturase B: “Threading model of the T7 large terminase within the GP8GP19 complex”. Electron microscopy, 20 pockets (best druggability 0.76). MolNFT v1 #86837 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 4BIL
Type: protein
Length: 2,380 residues
Chains: 5
Method: electron microscopy
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: DNA maturase B
UniProt: P03694
Pockets: 20 · best druggability 0.76

Structure

electron microscopy · 1 distinct chain · 34% helix, 16% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B, C, D, E	DNA maturase B	protein	476	34% helix, 16% strand	P03694

Pockets

20 pockets found on a 1 Å grid, 20 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	271	0.76	0.89	57	empty
2	73	0.74	0.98	27	empty
3	260	0.73	0.87	53	empty
4	67	0.72	0.97	27	empty
5	58	0.70	0.97	22	empty

Compared structures

4BIL · Threading model of the T7 large terminase within the gp8gp19 complex · the same entry in another collection · chain E against E, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P03694
Elsewhere: RCSB PDB 4BIL · PDBe 4BIL · UniProt P03694

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