MolNFT v1 · #86476 · protein
Glycogen synthase kinase 3 beta complexed with axin peptide and leucettine L4
4B7T · Glycogen synthase kinase-3 beta: “Glycogen synthase kinase 3 beta complexed with axin peptide and leucettine L4”. X-ray diffraction, 1 ligand (CWT), 2 pockets (best druggability 0.61). MolNFT v1 #86476 on GenesisL1: 3D structure…
- PDB
- 4B7T
- Type
- protein
- Length
- 368 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Glycogen synthase kinase-3 beta; Axin-1
- EC
- 2.7.11.26, 2.7.11.1
- UniProt
- P49841, O15169
- Ligands
- CWT
- Pockets
- 2 · best druggability 0.61
Structure
x-ray diffraction · 2 distinct chains · 36% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glycogen synthase kinase-3 beta (EC 2.7.11.26, 2.7.11.1) | protein | 350 | 33% helix, 19% strand | P49841 |
| B | Axin-1 | protein | 18 | 89% helix, 0% strand | O15169 |
Ligands and binding sites
- CWT · (5Z)-5-(1,3-benzodioxol-5-ylmethylidene)-3-methyl-2-(propan-2-ylamino)imidazol-4-one · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 246 | 0.61 | 0.80 | 26 | CWT |
| 2 | 141 | 0.43 | 0.76 | 33 | empty |
Interfaces
1 interface between chains.
- A–B · 729 Ų buried · 2 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P49841
- Every structure of UniProt O15169
- Elsewhere: RCSB PDB 4B7T · PDBe 4B7T · UniProt P49841 · UniProt O15169
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