MolNFT v1 · #86359 · protein
Bacterial translation initiation factor IF2 (1-363), complex with GTP
4B48 · Translation initiation factor if-2: “Bacterial translation initiation factor IF2 (1-363), complex with GTP”. X-ray diffraction, 2 ligands (GTP, MG), 1 pocket (best druggability 0.62). MolNFT v1 #86359 on GenesisL1: 3D structure…
- PDB
- 4B48
- Type
- protein
- Length
- 348 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Translation initiation factor if-2
- UniProt
- P48515
- Ligands
- GTP, MG
- Pockets
- 1 · best druggability 0.62
Structure
x-ray diffraction · 1 distinct chain · 33% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Translation initiation factor if-2 | protein | 348 | 33% helix, 26% strand | P48515 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 316 | 0.62 | 0.79 | 35 | empty |
Compared structures
- 4B48 · Bacterial translation initiation factor IF2 (1-363), complex with GTP · the same entry in another collection · chain A against A, TM-score 1.00
- P48515 · AlphaFold monomer V2.0 prediction for translation initiation factor if-2 (P48515) · a predicted model of the same protein · chain A against A, TM-score 0.75
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P48515
- Elsewhere: RCSB PDB 4B48 · PDBe 4B48 · UniProt P48515
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