MolNFT v1 · #85817 · protein
Complexes of PI3KGAMMA with isoform selective inhibitors.
4ANV · Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic…: “Complexes of PI3KGAMMA with isoform selective inhibitors.”. X-ray diffraction, 2 ligands (751, SO4), 12 pockets (best druggability 0.81). MolNFT v1 #85817 on GenesisL1: 3D…
- PDB
- 4ANV
- Type
- protein
- Length
- 848 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma isoform
- EC
- 2.7.1.137, 2.7.1.153, 2.7.11.1
- UniProt
- P48736
- Ligands
- 751, SO4
- Pockets
- 12 · best druggability 0.81
Structure
x-ray diffraction · 1 distinct chain · 42% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma isoform (EC 2.7.1.137, 2.7.1.153, 2.7.11.1) | protein | 848 | 42% helix, 18% strand | P48736 |
Ligands and binding sites
- 751 · 2-{4-[(4'-methoxybiphenyl-3-yl)sulfonyl]piperazin-1-yl}-3-(4-methoxyphenyl)pyrazine · ligand · chains A
- SO4 · Sulfate ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
12 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1179 | 0.81 | 0.82 | 87 | empty |
| 2 | 326 | 0.69 | 0.82 | 31 | 751 |
| 3 | 51 | 0.67 | 0.97 | 19 | empty |
| 4 | 360 | 0.63 | 0.78 | 35 | empty |
| 5 | 317 | 0.62 | 0.79 | 47 | empty |
Compared structures
- 4ANV · Complexes of PI3Kgamma with isoform selective inhibitors. · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P48736
- Elsewhere: RCSB PDB 4ANV · PDBe 4ANV · UniProt P48736
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