MolNFT v1 · #8420 · protein

Multimodular pneumococcal cell wall endolysin from phage cp-1

1H09 · Lysozyme: “Multimodular pneumococcal cell wall endolysin from phage cp-1”. X-ray diffraction, 3 pockets (best druggability 0.37). MolNFT v1 #8420 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1H09
Type: protein
Length: 338 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Lysozyme
EC: 3.2.1.17
UniProt: P15057
Pockets: 3 · best druggability 0.37

Structure

x-ray diffraction · 1 distinct chain · 20% helix, 37% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Lysozyme (EC 3.2.1.17)	protein	338	20% helix, 37% strand	P15057

Pockets

3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	68	0.37	0.78	16	empty
2	95	0.34	0.74	22	empty
3	65	0.31	0.75	21	empty

Compared structures

1H09 · Multimodular Pneumococcal Cell Wall Endolysin from phage Cp-1 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P15057
Elsewhere: RCSB PDB 1H09 · PDBe 1H09 · UniProt P15057

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