Research workbench
Multimodular pneumococcal cell wall endolysin from phage cp-1
Analyse Multimodular pneumococcal cell wall endolysin from phage cp-1 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1H09
- Type
- protein
- Length
- 338 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Lysozyme
- EC
- 3.2.1.17
- UniProt
- P15057
- Pockets
- 3 · best druggability 0.37
Structure
x-ray diffraction · 1 distinct chain · 20% helix, 37% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lysozyme (EC 3.2.1.17) | protein | 338 | 20% helix, 37% strand | P15057 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 68 | 0.37 | 0.78 | 16 | empty |
| 2 | 95 | 0.34 | 0.74 | 22 | empty |
| 3 | 65 | 0.31 | 0.75 | 21 | empty |
Compared structures
- 1H09 · Multimodular Pneumococcal Cell Wall Endolysin from phage Cp-1 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P15057
- Elsewhere: RCSB PDB 1H09 · PDBe 1H09 · UniProt P15057
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