MolNFT v1 · #83833 · protein
Crystal structure of the ubiquitin-binding zinc finger (ubz) domain of the human DNA polymerase eta
3WUP: “Crystal structure of the ubiquitin-binding zinc finger (ubz) domain of the human DNA polymerase eta”. X-ray diffraction, 3 ligands (ZN, NA, CL). MolNFT v1 #83833 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3WUP
- Type
- protein
- Length
- 31 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA polymerase eta
- EC
- 2.7.7.7
- UniProt
- Q9Y253
- Ligands
- ZN, NA, CL
Structure
x-ray diffraction · 1 distinct chain · 52% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA polymerase eta (EC 2.7.7.7) | protein | 31 | 52% helix, 19% strand | Q9Y253 |
Ligands and binding sites
- ZN · Zinc ion · metal · chains A
- NA · Sodium ion · metal · chains A
- CL · Chloride ion · ion · chains A
- GOL · Glycerol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 3WUP · Crystal Structure of the Ubiquitin-Binding Zinc Finger (UBZ) Domain of the Human DNA… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Y253
- Elsewhere: RCSB PDB 3WUP · PDBe 3WUP · UniProt Q9Y253
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