MolNFT v1 · #83193 · protein

Crystal structure of human LC3C_8-125

3WAM · Microtubule-associated proteins 1A/1B light chain 3C: “Crystal structure of human LC3C_8-125”. X-ray diffraction, 1 pocket (best druggability 0.40). MolNFT v1 #83193 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 3WAM
Type: protein
Length: 115 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Microtubule-associated proteins 1A/1B light chain 3C
UniProt: Q9BXW4
Pockets: 1 · best druggability 0.40

Structure

x-ray diffraction · 1 distinct chain · 32% helix, 25% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Microtubule-associated proteins 1A/1B light chain 3C	protein	115	32% helix, 25% strand	Q9BXW4

Ligands and binding sites

CIT · Citric acid · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	121	0.40	0.75	24	empty

Compared structures

3WAM · Crystal structure of human LC3C_8-125 · the same entry in another collection · chain A against A, TM-score 1.00
Q9BXW4 · AlphaFold monomer V2.0 prediction for microtubule-associated proteins 1A/1B light chain… · a predicted model of the same protein · chain A against A, TM-score 0.92

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9BXW4
Elsewhere: RCSB PDB 3WAM · PDBe 3WAM · UniProt Q9BXW4

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.