MolNFT v1 · #81960 · protein
1.9 ångström resolution crystal structure of the protein Q9SIY3 from arabidopsis thaliana
3V85 · Cyth-like phosphatase: “1.9 ångström resolution crystal structure of the protein Q9SIY3 from arabidopsis thaliana”. X-ray diffraction, 1 pocket (best druggability 0.67). MolNFT v1 #81960 on GenesisL1: 3D structure, binding sites and…
- PDB
- 3V85
- Type
- protein
- Length
- 204 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cyth-like phosphatase
- UniProt
- Q9SIY3
- Pockets
- 1 · best druggability 0.67
Structure
x-ray diffraction · 1 distinct chain · 31% helix, 45% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cyth-like phosphatase | protein | 204 | 31% helix, 45% strand | Q9SIY3 |
Ligands and binding sites
- CIT · Citric acid · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 336 | 0.67 | 0.82 | 42 | CIT |
Compared structures
- 3V85 · 1.9 Angstrom resolution crystal structure of the protein Q9SIY3 from Arabidopsis thaliana · the same entry in another collection · chain A against A, TM-score 1.00
- Q9SIY3 · AlphaFold monomer V2.0 prediction for triphosphate tunnel metalloenzyme 3 (Q9SIY3) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9SIY3
- Elsewhere: RCSB PDB 3V85 · PDBe 3V85 · UniProt Q9SIY3
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