MolNFT v1 · #81830 · protein
Structure of ar lbd with activator peptide and sarm inhibitor 1
3V49 · Androgen receptor: “Structure of ar lbd with activator peptide and sarm inhibitor 1”. X-ray diffraction, 2 ligands (PK0, SO4), 1 pocket (best druggability 0.81). MolNFT v1 #81830 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 3V49
- Type
- protein
- Length
- 255 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Androgen receptor; Androgen receptor, activator peptide
- UniProt
- P10275
- Ligands
- PK0, SO4
- Pockets
- 1 · best druggability 0.81
Structure
x-ray diffraction · 2 distinct chains · 70% helix, 5% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Androgen receptor | protein | 244 | 70% helix, 5% strand | P10275 |
| B | Androgen receptor, activator peptide | protein | 11 | 73% helix, 0% strand | P10275 |
Ligands and binding sites
- PK0 · 4-[(4R)-4-(4-hydroxyphenyl)-3,4-dimethyl-2,5-dioxoimidazolidin-1-yl]-2-(trifluoromethyl)benzonitrile · ligand · chains A
- SO4 · Sulfate ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 314 | 0.81 | 0.91 | 48 | PK0 |
Interfaces
1 interface between chains.
- A–B · 577 Ų buried · 6 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P10275
- Elsewhere: RCSB PDB 3V49 · PDBe 3V49 · UniProt P10275
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