MolNFT v1 · #81791 · protein

Crystal structure of the peptide bound complex of the ankyrin repeat domains of human rfxank

3V30 · DNA-binding protein rfxank: “Crystal structure of the peptide bound complex of the ankyrin repeat domains of human rfxank”. X-ray diffraction. MolNFT v1 #81791 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 3V30
Type: protein
Length: 177 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: DNA-binding protein rfxank; DNA-binding protein RFX5
UniProt: O14593, P48382

Structure

x-ray diffraction · 2 distinct chains · 50% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	DNA-binding protein rfxank	protein	161	55% helix, 0% strand	O14593
B	DNA-binding protein RFX5	protein	16	0% helix, 0% strand	P48382

Interfaces

1 interface between chains.

A–B · 876 Å² buried · 9 hydrogen bonds · protein-protein

Compared structures

3V30 · Crystal Structure of the Peptide Bound Complex of the Ankyrin Repeat Domains of Human… · the same entry in another collection · chain A against A, TM-score 1.00
O14593 · AlphaFold monomer V2.0 prediction for DNA-binding protein rfxank (O14593) · a predicted model of the same protein · chain A against A, TM-score 0.99
P48382 · AlphaFold monomer V2.0 prediction for DNA-binding protein RFX5 (P48382) · a predicted model of the same protein · chain B against A, TM-score 0.32

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O14593
Every structure of UniProt P48382
Elsewhere: RCSB PDB 3V30 · PDBe 3V30 · UniProt O14593 · UniProt P48382

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