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Crystal structure of the peptide bound complex of the ankyrin repeat domains of human rfxank

Analyse Crystal structure of the peptide bound complex of the ankyrin repeat domains of… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3V30
Type: protein
Length: 177 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: DNA-binding protein rfxank; DNA-binding protein RFX5
UniProt: O14593, P48382

Structure

x-ray diffraction · 2 distinct chains · 50% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	DNA-binding protein rfxank	protein	161	55% helix, 0% strand	O14593
B	DNA-binding protein RFX5	protein	16	0% helix, 0% strand	P48382

Interfaces

1 interface between chains.

A–B · 876 Å² buried · 9 hydrogen bonds · protein-protein

Compared structures

3V30 · Crystal Structure of the Peptide Bound Complex of the Ankyrin Repeat Domains of Human… · the same entry in another collection · chain A against A, TM-score 1.00
O14593 · AlphaFold monomer V2.0 prediction for DNA-binding protein rfxank (O14593) · a predicted model of the same protein · chain A against A, TM-score 0.99
P48382 · AlphaFold monomer V2.0 prediction for DNA-binding protein RFX5 (P48382) · a predicted model of the same protein · chain B against A, TM-score 0.32

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O14593
Every structure of UniProt P48382
Elsewhere: RCSB PDB 3V30 · PDBe 3V30 · UniProt O14593 · UniProt P48382

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