MolNFT v1 · #81519 · protein
Structural view of a non pfam singleton and crystal packing analysis
3UT8 · Putative uncharacterized protein: “Structural view of a non pfam singleton and crystal packing analysis”. X-ray diffraction, 1 ligand (IOD), 2 pockets (best druggability 0.47). MolNFT v1 #81519 on GenesisL1: 3D structure, binding…
- PDB
- 3UT8
- Type
- protein
- Length
- 256 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative uncharacterized protein
- UniProt
- A3DJ21
- Ligands
- IOD
- Pockets
- 2 · best druggability 0.47
Structure
x-ray diffraction · 1 distinct chain · 70% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Putative uncharacterized protein | protein | 128 | 70% helix, 0% strand | A3DJ21 |
Ligands and binding sites
- IOD · Iodide ion · ion · 5 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 165 | 0.47 | 0.76 | 21 | empty |
| 2 | 114 | 0.36 | 0.73 | 20 | empty |
Interfaces
1 interface between chains.
- A–B · 956 Ų buried · 2 hydrogen bonds · protein-protein
Compared structures
- 3UT8 · Structural view of a non Pfam singleton and crystal packing analysis · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A3DJ21
- Elsewhere: RCSB PDB 3UT8 · PDBe 3UT8 · UniProt A3DJ21
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