MolNFT v1 · #8086 · protein

Human mir-receptor, repeat 11

1GQB · Cation-independent mannose-6-phosphate receptor: “Human mir-receptor, repeat 11”. X-ray diffraction, 1 ligand (BR). MolNFT v1 #8086 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1GQB
Type: protein
Length: 261 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Cation-independent mannose-6-phosphate receptor
UniProt: P11717
Ligands: BR

Structure

x-ray diffraction · 2 distinct chains · 5% helix, 44% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Cation-independent mannose-6-phosphate receptor	protein	131	5% helix, 42% strand	P11717
B	Cation-independent mannose-6-phosphate receptor	protein	130	5% helix, 45% strand	P11717

Ligands and binding sites

BR · Bromide ion · ion · 10 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

A–B · 309 Å² buried · 1 hydrogen bond · protein-protein

Modifications

Observed in the structure: 8 disulfide (disulfide).

Compared structures

1GQB · Human mir-receptor, repeat 11 · the same entry in another collection · chain A against A, TM-score 1.00
P11717 · AlphaFold monomer V2.0 prediction for cation-independent mannose-6-phosphate receptor… · a predicted model of the same protein · chain B against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P11717
Elsewhere: RCSB PDB 1GQB · PDBe 1GQB · UniProt P11717

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