MolNFT v1 · #80623 · protein
Crystal structure of the C-terminal DUF1608 domain of the methanosarcina acetivorans S-layer (MA0829) protein
3U2G · S-layer protein MA0829: “Crystal structure of the C-terminal DUF1608 domain of the methanosarcina acetivorans S-layer (MA0829) protein”. X-ray diffraction, 1 ligand (NH4), 1 pocket (best druggability 0.37). MolNFT v1 #80623 on…
- PDB
- 3U2G
- Type
- protein
- Length
- 274 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- S-layer protein MA0829
- UniProt
- Q8TSG7
- Ligands
- NH4
- Pockets
- 1 · best druggability 0.37
Structure
x-ray diffraction · 1 distinct chain · 4% helix, 59% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | S-layer protein MA0829 | protein | 274 | 4% helix, 59% strand | Q8TSG7 |
Ligands and binding sites
- NH4 · Ammonium ion · ion · chains A
- GOL · Glycerol · additive · 2 copies · chains A
- CIT · Citric acid · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 81 | 0.37 | 0.76 | 21 | empty |
Modifications
Observed in the structure: 5 modified (engineered).
Compared structures
- 3U2G · Crystal structure of the C-terminal DUF1608 domain of the Methanosarcina acetivorans… · the same entry in another collection · chain A against A, TM-score 1.00
- Q8TSG7 · AlphaFold monomer V2.0 prediction for major S-layer protein (Q8TSG7) · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8TSG7
- Elsewhere: RCSB PDB 3U2G · PDBe 3U2G · UniProt Q8TSG7
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