MolNFT v1 · #80387 · protein
Crystal structure of putative peptide maturation protein from shigella flexneri
3TV9: “Crystal structure of putative peptide maturation protein from shigella flexneri”. X-ray diffraction, 1 ligand (SO4), 4 pockets (best druggability 0.54). MolNFT v1 #80387 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3TV9
- Type
- protein
- Length
- 436 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative peptide maturation protein
- UniProt
- Q7UAN7
- Ligands
- SO4
- Pockets
- 4 · best druggability 0.54
Structure
x-ray diffraction · 1 distinct chain · 25% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative peptide maturation protein | protein | 436 | 25% helix, 36% strand | Q7UAN7 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 290 | 0.54 | 0.75 | 46 | GOL |
| 2 | 197 | 0.45 | 0.74 | 29 | SO4 |
| 3 | 91 | 0.38 | 0.76 | 18 | empty |
| 4 | 93 | 0.33 | 0.73 | 23 | empty |
Modifications
Observed in the structure: 9 modified (engineered).
Compared structures
- 3TV9 · Crystal Structure of Putative Peptide Maturation Protein from Shigella flexneri · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7UAN7
- Elsewhere: RCSB PDB 3TV9 · PDBe 3TV9 · UniProt Q7UAN7
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