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Crystal structure of putative peptide maturation protein from shigella flexneri

Analyse Crystal structure of putative peptide maturation protein from shigella flexneri in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3TV9
Type: protein
Length: 436 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative peptide maturation protein
UniProt: Q7UAN7
Ligands: SO4
Pockets: 4 · best druggability 0.54

Structure

x-ray diffraction · 1 distinct chain · 25% helix, 36% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Putative peptide maturation protein	protein	436	25% helix, 36% strand	Q7UAN7

Ligands and binding sites

SO4 · Sulfate ion · ion · 3 copies · chains A
GOL · Glycerol · additive · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	290	0.54	0.75	46	GOL
2	197	0.45	0.74	29	SO4
3	91	0.38	0.76	18	empty
4	93	0.33	0.73	23	empty

Modifications

Observed in the structure: 9 modified (engineered).

Compared structures

3TV9 · Crystal Structure of Putative Peptide Maturation Protein from Shigella flexneri · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q7UAN7
Elsewhere: RCSB PDB 3TV9 · PDBe 3TV9 · UniProt Q7UAN7

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