GL1X · GenesisL1 explorer

MolNFT v1 · #79460 · protein

1.57 a structure of FRIEDREICH'S ataxia frataxin variant R165C

3T3X · Frataxin, mitochondrial: “1.57 a structure of FRIEDREICH'S ataxia frataxin variant R165C”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #79460 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
3T3X
Type
protein
Length
243 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Frataxin, mitochondrial
EC
1.16.3.1
UniProt
Q16595
Ligands
SO4

Structure

x-ray diffraction · 2 distinct chains · 32% helix, 28% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AFrataxin, mitochondrial (EC 1.16.3.1)protein12230% helix, 28% strandQ16595
BFrataxin, mitochondrial (EC 1.16.3.1)protein12133% helix, 29% strandQ16595

Ligands and binding sites

  • SO4 · Sulfate ion · ion · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

  • A–B · 741 Ų buried · 19 hydrogen bonds · protein-protein

Compared structures

  • 3T3X · 1.57 A structure of Friedreich's ataxia frataxin variant R165C · the same entry in another collection · chain A against A, TM-score 1.00
  • Q16595 · AlphaFold monomer V2.0 prediction for frataxin, mitochondrial (Q16595) · a predicted model of the same protein · chain A against A, TM-score 0.99

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