MolNFT v1 · #78793 · protein
Crystal structure of URE3-binding protein from entamoeba histolytica, (D127A,N129A) mutant, native form
3SJS · URE3-bp sequence specific DNA binding protein: “Crystal structure of URE3-binding protein from entamoeba histolytica, (D127A,N129A) mutant, native form”. X-ray diffraction, 1 ligand (CA), 3 pockets (best druggability 0.47). MolNFT…
- PDB
- 3SJS
- Type
- protein
- Length
- 212 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- URE3-bp sequence specific DNA binding protein
- UniProt
- Q9GSV7
- Ligands
- CA
- Pockets
- 3 · best druggability 0.47
Structure
x-ray diffraction · 1 distinct chain · 63% helix, 4% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | URE3-bp sequence specific DNA binding protein | protein | 212 | 63% helix, 4% strand | Q9GSV7 |
Ligands and binding sites
- CA · Calcium ion · metal · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 130 | 0.47 | 0.77 | 15 | empty |
| 2 | 109 | 0.42 | 0.77 | 17 | empty |
| 3 | 95 | 0.41 | 0.76 | 13 | empty |
Compared structures
- 3SJS · Crystal structure of URE3-binding protein from Entamoeba histolytica, (D127A,N129A)… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9GSV7
- Elsewhere: RCSB PDB 3SJS · PDBe 3SJS · UniProt Q9GSV7
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