MolNFT v1 · #78774 · protein

Crystal structure of the C147A mutant 3C of CVA16 in complex with faglrqavtq peptide

3SJ9 · 3C protease: “Crystal structure of the C147A mutant 3C of CVA16 in complex with faglrqavtq peptide”. X-ray diffraction, 1 pocket (best druggability 0.36). MolNFT v1 #78774 on GenesisL1: 3D structure, binding sites and pockets in…

PDB: 3SJ9
Type: protein
Length: 187 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: 3C protease; Faglrqavtq peptide
EC: 3.4.22.28
UniProt: C8CIL7
Pockets: 1 · best druggability 0.36

Structure

x-ray diffraction · 2 distinct chains · 10% helix, 55% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	3C protease (EC 3.4.22.28)	protein	179	11% helix, 55% strand	C8CIL7
B	Faglrqavtq peptide	protein	8	0% helix, 50% strand	—

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	67	0.36	0.76	12	empty

Interfaces

1 interface between chains.

A–B · 550 Å² buried · 20 hydrogen bonds · protein-protein

Compared structures

3SJ9 · crystal structure of the C147A mutant 3C of CVA16 in complex with FAGLRQAVTQ peptide · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt C8CIL7
Elsewhere: RCSB PDB 3SJ9 · PDBe 3SJ9 · UniProt C8CIL7

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