MolNFT v1 · #77318 · protein
Structure of the phage tubulin PHUZ(SEMET)-GDP
3RB8 · Putative uncharacterized protein: “Structure of the phage tubulin PHUZ(SEMET)-GDP”. X-ray diffraction, 2 ligands (GDP, MG), 1 pocket (best druggability 0.49). MolNFT v1 #77318 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 3RB8
- Type
- protein
- Length
- 314 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative uncharacterized protein
- UniProt
- B3FK34
- Ligands
- GDP, MG
- Pockets
- 1 · best druggability 0.49
Structure
x-ray diffraction · 1 distinct chain · 41% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative uncharacterized protein | protein | 314 | 41% helix, 19% strand | B3FK34 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 180 | 0.49 | 0.77 | 31 | GDP, MG |
Modifications
Observed in the structure: 8 modified (engineered).
Compared structures
- 3RB8 · Structure of the phage tubulin PhuZ(SeMet)-GDP · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B3FK34
- Elsewhere: RCSB PDB 3RB8 · PDBe 3RB8 · UniProt B3FK34
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