MolNFT v1 · #75944 · protein
Crystal structure of human titin domain M10
3Q5O: “Crystal structure of human titin domain M10”. X-ray diffraction, 1 ligand (SO4), 1 pocket (best druggability 0.57). MolNFT v1 #75944 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3Q5O
- Type
- protein
- Length
- 200 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Titin
- EC
- 2.7.11.1
- UniProt
- Q8WZ42
- Ligands
- SO4
- Pockets
- 1 · best druggability 0.57
Structure
x-ray diffraction · 1 distinct chain · 3% helix, 60% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Titin (EC 2.7.11.1) | protein | 100 | 3% helix, 60% strand | Q8WZ42 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 4 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 319 | 0.57 | 0.77 | 34 | SO4 |
Interfaces
1 interface between chains.
- A–B · 482 Ų buried · 15 hydrogen bonds · protein-protein
Compared structures
- 3Q5O · Crystal structure of human titin domain M10 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8WZ42
- Elsewhere: RCSB PDB 3Q5O · PDBe 3Q5O · UniProt Q8WZ42
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