MolNFT v1 · #75722 · protein

The structure of the slh domain from B. anthracis surface array protein at 1.8A

3PYW · S-layer protein sap: “The structure of the slh domain from B. anthracis surface array protein at 1.8A”. X-ray diffraction, 1 ligand (SO4), 2 pockets (best druggability 0.45). MolNFT v1 #75722 on GenesisL1: 3D structure, binding…

PDB: 3PYW
Type: protein
Length: 178 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: S-layer protein sap
UniProt: P49051
Ligands: SO4
Pockets: 2 · best druggability 0.45

Structure

x-ray diffraction · 1 distinct chain · 43% helix, 4% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	S-layer protein sap	protein	178	43% helix, 4% strand	P49051

Ligands and binding sites

SO4 · Sulfate ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	119	0.45	0.78	23	empty
2	102	0.42	0.77	15	empty

Compared structures

3PYW · The structure of the SLH domain from B. anthracis surface array protein at 1.8A · the same entry in another collection · chain A against A, TM-score 1.00
P49051 · AlphaFold monomer V2.0 prediction for S-layer protein sap (P49051) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P49051
Elsewhere: RCSB PDB 3PYW · PDBe 3PYW · UniProt P49051

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