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The structure of the slh domain from B. anthracis surface array protein at 1.8A

Analyse The structure of the slh domain from B. anthracis surface array protein at 1.8A in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3PYW
Type: protein
Length: 178 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: S-layer protein sap
UniProt: P49051
Ligands: SO4
Pockets: 2 · best druggability 0.45

Structure

x-ray diffraction · 1 distinct chain · 43% helix, 4% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	S-layer protein sap	protein	178	43% helix, 4% strand	P49051

Ligands and binding sites

SO4 · Sulfate ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	119	0.45	0.78	23	empty
2	102	0.42	0.77	15	empty

Compared structures

3PYW · The structure of the SLH domain from B. anthracis surface array protein at 1.8A · the same entry in another collection · chain A against A, TM-score 1.00
P49051 · AlphaFold monomer V2.0 prediction for S-layer protein sap (P49051) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P49051
Elsewhere: RCSB PDB 3PYW · PDBe 3PYW · UniProt P49051

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