MolNFT v1 · #75186 · protein
Crystal structure of M-RASD41E in complex with gppnhp (type 1)
3PIR · RAS-related protein M-RAS: “Crystal structure of M-RASD41E in complex with gppnhp (type 1)”. X-ray diffraction, 2 ligands (GNP, MG), 1 pocket (best druggability 0.47). MolNFT v1 #75186 on GenesisL1: 3D structure, binding sites and…
- PDB
- 3PIR
- Type
- protein
- Length
- 168 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- RAS-related protein M-RAS
- UniProt
- O08989
- Ligands
- GNP, MG
- Pockets
- 1 · best druggability 0.47
Structure
x-ray diffraction · 1 distinct chain · 37% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RAS-related protein M-RAS | protein | 168 | 37% helix, 26% strand | O08989 |
Ligands and binding sites
- GNP · Phosphoaminophosphonic acid-guanylate ester · ligand · chains A
- MG · Magnesium ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 192 | 0.47 | 0.75 | 36 | GNP, MG |
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O08989
- Elsewhere: RCSB PDB 3PIR · PDBe 3PIR · UniProt O08989
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