MolNFT v1 · #74828 · protein
Crystal structure enoyl-CoA hydratase from mycobacterium avium
3P85: “Crystal structure enoyl-CoA hydratase from mycobacterium avium”. X-ray diffraction, 1 ligand (CA), 3 pockets (best druggability 0.53). MolNFT v1 #74828 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3P85
- Type
- protein
- Length
- 224 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Enoyl-CoA hydratase
- UniProt
- A0QIX8
- Ligands
- CA
- Pockets
- 3 · best druggability 0.53
Structure
x-ray diffraction · 1 distinct chain · 47% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Enoyl-CoA hydratase | protein | 224 | 47% helix, 19% strand | A0QIX8 |
Ligands and binding sites
- CA · Calcium ion · metal · 2 copies · chains A
- ACT · Acetate ion · additive · chains A
- CAC · Cacodylate ion · additive · chains A
- 1PE · Pentaethylene glycol · additive · chains A
- EDO · 1,2-ethanediol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 163 | 0.53 | 0.79 | 26 | CAC |
| 2 | 247 | 0.52 | 0.76 | 41 | empty |
| 3 | 86 | 0.36 | 0.75 | 19 | empty |
Compared structures
- 3P85 · Crystal structure enoyl-coa hydratase from mycobacterium avium · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0QIX8
- Elsewhere: RCSB PDB 3P85 · PDBe 3P85 · UniProt A0QIX8
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