MolNFT v1 · #74041 · protein
Crystal structure of a putative uncharacterized protein from mycobacterium smegamtis, an ortholog of RV0543C, iodide phased
3OL3: “Crystal structure of a putative uncharacterized protein from mycobacterium smegamtis, an ortholog of RV0543C…”. X-ray diffraction, 1 ligand (IOD), 1 pocket (best druggability 0.59). MolNFT v1 #74041 on GenesisL1: 3D structure…
- PDB
- 3OL3
- Type
- protein
- Length
- 190 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative uncharacterized protein
- UniProt
- A0QRC4
- Ligands
- IOD
- Pockets
- 1 · best druggability 0.59
Structure
x-ray diffraction · 2 distinct chains · 65% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative uncharacterized protein | protein | 98 | 64% helix, 3% strand | A0QRC4 |
| B | Putative uncharacterized protein | protein | 92 | 65% helix, 3% strand | A0QRC4 |
Ligands and binding sites
- IOD · Iodide ion · ion · 21 copies · chains A, B
- PGE · Triethylene glycol · additive · 2 copies · chains A, B
- PG4 · Tetraethylene glycol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 237 | 0.59 | 0.79 | 27 | IOD, PG4 |
Interfaces
1 interface between chains.
- A–B · 794 Ų buried · 8 hydrogen bonds · protein-protein
Compared structures
- 3OL3 · Crystal structure of a putative uncharacterized protein from Mycobacterium smegamtis, an… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0QRC4
- Elsewhere: RCSB PDB 3OL3 · PDBe 3OL3 · UniProt A0QRC4
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