MolNFT v1 · #73576 · protein + DNA
Nucleosome core particle modified with a cisplatin 1,3-cis-{PT(NH3) 2}2+-D(GPTPG) intrastrand cross-link
3O62: “Nucleosome core particle modified with a cisplatin 1,3-cis-{PT(NH3) 2}2+-D(GPTPG) intrastrand cross-link”. X-ray diffraction. MolNFT v1 #73576 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3O62
- Type
- protein + DNA
- Length
- 1,053 residues
- Chains
- 10
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P84233, P62799, P06897, P02281
Structure
x-ray diffraction · 8 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, E | — | protein | 98 | — | P84233 |
| B | — | protein | 80 | — | P62799 |
| C | — | protein | 105 | — | P06897 |
| D, H | — | protein | 95 | — | P02281 |
| F | — | protein | 84 | — | P62799 |
| G | — | protein | 106 | — | P06897 |
| I | — | dna | 146 | — | — |
| J | — | dna | 146 | — | — |
Compared structures
- 3O62 · Nucleosome core particle modified with a cisplatin 1,3-cis-{Pt(NH3)2}2+-d(GpTpG)… · the same entry in another collection · chain J against J, TM-score 1.00
- P84233 · AlphaFold monomer V2.0 prediction for histone H3.2 (P84233) · a predicted model of the same protein · chain A against A, TM-score 0.97
- P06897 · AlphaFold monomer V2.0 prediction for histone H2A type 1 (P06897) · a predicted model of the same protein · chain C against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P84233
- Every structure of UniProt P62799
- Every structure of UniProt P06897
- Every structure of UniProt P02281
- Elsewhere: RCSB PDB 3O62 · PDBe 3O62 · UniProt P84233 · UniProt P62799 · UniProt P06897 · UniProt P02281
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.