MolNFT v1 · #72523 · protein
Crystal structure of aquifex aeolicus peptidoglycan glycosyltransferase in complex with methylphosphoryl neryl moenomycin
3NB6 · Penicillin-binding protein 1A: “Crystal structure of aquifex aeolicus peptidoglycan glycosyltransferase in complex with methylphosphoryl…”. X-ray diffraction, 1 pocket (best druggability 0.53). MolNFT v1 #72523 on GenesisL1: 3D…
- PDB
- 3NB6
- Type
- protein
- Length
- 183 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Penicillin-binding protein 1A
- EC
- 2.4.2.-
- UniProt
- O66874
- Pockets
- 1 · best druggability 0.53
Structure
x-ray diffraction · 1 distinct chain · 58% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Penicillin-binding protein 1A (EC 2.4.2.-) | protein | 183 | 58% helix, 1% strand | O66874 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 230 | 0.53 | 0.77 | 31 | empty |
Compared structures
- 3NB6 · Crystal structure of Aquifex aeolicus peptidoglycan glycosyltransferase in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
- O66874 · AlphaFold monomer V2.0 prediction for penicillin-binding protein 1A (O66874) · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O66874
- Elsewhere: RCSB PDB 3NB6 · PDBe 3NB6 · UniProt O66874
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