MolNFT v1 · #72335 · protein
Human fpps complex with NOV_304
3N5H · Farnesyl pyrophosphate synthase: “Human fpps complex with NOV_304”. X-ray diffraction, 2 ligands (GO0, PO4), 1 pocket (best druggability 0.79). MolNFT v1 #72335 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3N5H
- Type
- protein
- Length
- 343 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Farnesyl pyrophosphate synthase
- EC
- 2.5.1.1, 2.5.1.10
- UniProt
- P14324
- Ligands
- GO0, PO4
- Pockets
- 1 · best druggability 0.79
Structure
x-ray diffraction · 1 distinct chain · 75% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| F | Farnesyl pyrophosphate synthase (EC 2.5.1.1, 2.5.1.10) | protein | 343 | 75% helix, 1% strand | P14324 |
Ligands and binding sites
- GO0 · 3-(carboxymethyl)-4,7-dichloro-1H-indole-2-carboxylic acid · ligand · 2 copies · chains F
- PO4 · Phosphate ion · ion · chains F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 921 | 0.79 | 0.82 | 74 | GO0, PO4 |
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P14324
- Elsewhere: RCSB PDB 3N5H · PDBe 3N5H · UniProt P14324
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