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MolNFT v1 · #72328 · protein

Synaptotagmin-7, C2B-domain, calcium bound

3N5A: “Synaptotagmin-7, C2B-domain, calcium bound”. X-ray diffraction, 1 ligand (CA). MolNFT v1 #72328 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
3N5A
Type
protein
Length
138 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Synaptotagmin-7
UniProt
Q9R0N7
Ligands
CA

Structure

x-ray diffraction · 1 distinct chain · 13% helix, 51% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ASynaptotagmin-7protein13813% helix, 51% strandQ9R0N7

Ligands and binding sites

  • CA · Calcium ion · metal · 4 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 3N5A · Synaptotagmin-7, C2B-domain, calcium bound · the same entry in another collection · chain A against A, TM-score 1.00
  • Q9R0N7 · AlphaFold monomer V2.0 prediction for synaptotagmin-7 (Q9R0N7) · a predicted model of the same protein · chain A against A, TM-score 1.00

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