MolNFT v1 · #7211 · protein

NMR structure of N-terminal domain of HTLV-I CA1-134

1G03 · HTLV-I capsid protein: “NMR structure of N-terminal domain of HTLV-I CA1-134”. Solution nmr, 3 pockets (best druggability 0.50). MolNFT v1 #7211 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1G03
Type: protein
Length: 134 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: HTLV-I capsid protein
UniProt: P14077
Pockets: 3 · best druggability 0.50

Structure

solution nmr · 1 distinct chain · 57% helix, 3% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	HTLV-I capsid protein	protein	134	57% helix, 3% strand	P14077

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	89	0.50	0.82	20	empty
2	88	0.49	0.82	19	empty
3	77	0.42	0.79	19	empty

Compared structures

1G03 · NMR structure of N-terminal domain of HTLV-I CA1-134 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P14077
Elsewhere: RCSB PDB 1G03 · PDBe 1G03 · UniProt P14077

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