Research workbench
NMR structure of N-terminal domain of HTLV-I CA1-134
Analyse NMR structure of N-terminal domain of HTLV-I CA1-134 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1G03
- Type
- protein
- Length
- 134 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- HTLV-I capsid protein
- UniProt
- P14077
- Pockets
- 3 · best druggability 0.50
Structure
solution nmr · 1 distinct chain · 57% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | HTLV-I capsid protein | protein | 134 | 57% helix, 3% strand | P14077 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 89 | 0.50 | 0.82 | 20 | empty |
| 2 | 88 | 0.49 | 0.82 | 19 | empty |
| 3 | 77 | 0.42 | 0.79 | 19 | empty |
Compared structures
- 1G03 · NMR structure of N-terminal domain of HTLV-I CA1-134 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P14077
- Elsewhere: RCSB PDB 1G03 · PDBe 1G03 · UniProt P14077
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