MolNFT v1 · #72027 · protein
Crystal structure of beta-neurexin 2 with the splice insert 4
3MW3 · Neurexin-2-beta: “Crystal structure of beta-neurexin 2 with the splice insert 4”. X-ray diffraction, 3 ligands (NAG, BMA, CA). MolNFT v1 #72027 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3MW3
- Type
- protein
- Length
- 189 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Neurexin-2-beta
- UniProt
- D3ZX24
- Ligands
- NAG, BMA, CA
Structure
x-ray diffraction · 1 distinct chain · 5% helix, 53% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Neurexin-2-beta | protein | 189 | 5% helix, 53% strand | D3ZX24 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 2 copies · chains A
- BMA · beta-D-mannopyranose · sugar · chains A
- CA · Calcium ion · metal · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 1 glycan (N-glycosylation).
Compared structures
- 3MW3 · Crystal structure of beta-neurexin 2 with the splice insert 4 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D3ZX24
- Elsewhere: RCSB PDB 3MW3 · PDBe 3MW3 · UniProt D3ZX24
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