MolNFT v1 · #71975 · protein

Crystal structure of BRD4 bromodomain 1 with butyrylated histone H3- K(BUTY)14

3MUL · Bromodomain-containing protein 4: “Crystal structure of BRD4 bromodomain 1 with butyrylated histone H3- K(BUTY)14”. X-ray diffraction. MolNFT v1 #71975 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 3MUL
Type: protein
Length: 129 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Bromodomain-containing protein 4; Peptide of histone H3.3
UniProt: Q9ESU6, P84243

Structure

x-ray diffraction · 2 distinct chains · 50% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Bromodomain-containing protein 4	protein	127	51% helix, 0% strand	Q9ESU6
D	Peptide of histone H3.3	protein	2	0% helix, 0% strand	P84243

Ligands and binding sites

EDO · 1,2-ethanediol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

A–D · 253 Å² buried · 3 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 1 modified (nonstandard).

Compared structures

3MUL · Crystal structure of Brd4 bromodomain 1 with butyrylated histone H3-K(buty)14 · the same entry in another collection · chain A against A, TM-score 1.00
Q9ESU6 · AlphaFold monomer V2.0 prediction for bromodomain-containing protein 4 (Q9ESU6) · a predicted model of the same protein · chain A against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9ESU6
Every structure of UniProt P84243
Elsewhere: RCSB PDB 3MUL · PDBe 3MUL · UniProt Q9ESU6 · UniProt P84243

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