MolNFT v1 · #69572 · protein
Crystal structure of C-terminal domain of PABPC1 in complex with binding region of ERF3A
3KUI · Polyadenylate-binding protein 1: “Crystal structure of C-terminal domain of PABPC1 in complex with binding region of ERF3A”. X-ray diffraction, 2 ligands (ZN, SO4). MolNFT v1 #69572 on GenesisL1: 3D structure, binding sites and…
- PDB
- 3KUI
- Type
- protein
- Length
- 94 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Polyadenylate-binding protein 1; GSPT1 protein
- UniProt
- P11940, Q96GF2
- Ligands
- ZN, SO4
Structure
x-ray diffraction · 2 distinct chains · 68% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Polyadenylate-binding protein 1 | protein | 81 | 79% helix, 0% strand | P11940 |
| B | GSPT1 protein | protein | 13 | 0% helix, 0% strand | Q96GF2 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 668 Ų buried · 5 hydrogen bonds · protein-protein
Compared structures
- 3KUI · Crystal structure of C-terminal domain of PABPC1 in complex with binding region of eRF3a · the same entry in another collection · chain A against A, TM-score 1.00
- P11940 · AlphaFold monomer V2.0 prediction for polyadenylate-binding protein 1 (P11940) · a predicted model of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P11940
- Every structure of UniProt Q96GF2
- Elsewhere: RCSB PDB 3KUI · PDBe 3KUI · UniProt P11940 · UniProt Q96GF2
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.