MolNFT v1 · #69365 · protein

Dtd from plasmodium falciparum in complex with D-serine

3KOD: “Dtd from plasmodium falciparum in complex with D-serine”. X-ray diffraction. MolNFT v1 #69365 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 3KOD
Type: protein
Length: 916 residues
Chains: 6
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q8IIS0

Structure

x-ray diffraction · 5 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, F	—	protein	151	—	Q8IIS0
B	—	protein	158	—	Q8IIS0
C	—	protein	156	—	Q8IIS0
D	—	protein	153	—	Q8IIS0
E	—	protein	147	—	Q8IIS0

Compared structures

3KOD · DTD from Plasmodium falciparum in complex with D-Serine · the same entry in another collection · chain F against F, TM-score 1.00
Q8IIS0 · AlphaFold monomer V2.0 prediction for D-aminoacyl-tRNA deacylase (Q8IIS0) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8IIS0
Elsewhere: RCSB PDB 3KOD · PDBe 3KOD · UniProt Q8IIS0

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