UniProt Q8IIS0
D-tyrosyl-tRNA(Tyr) deacylase (Q8IIS0)
D-tyrosyl-tRNA(Tyr) deacylase (UniProt Q8IIS0), EC 3.1.-.-: 32 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 13 pockets. Binding sites, druggability and experiment against prediction (TM-score) in…
- UniProt
- Q8IIS0
- Protein
- D-tyrosyl-tRNA(Tyr) deacylase
- EC
- 3.1.-.-
- Experimental structures
- 32
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 13 · 1 record with a druggable one
Structures
33 records of Q8IIS0 in the MolNFT archive: 32 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 3KNF | Crystal structure of D-Tyr-tRNA(Tyr) deacylase from Plasmodium falciparum | x-ray diffraction | A, B, C, D, E, F | — | — |
| 3KNF | Crystal structure of D-tyr-TRNA(TYR) deacylase from plasmodium falciparum | x-ray diffraction | A, B, C, D, E, F | — | — |
| 3KNP | Crystal structure of DTD from Plasmodium falciparum | x-ray diffraction | A, B, C, D, E, F | — | — |
| 3KNP | Crystal structure of dtd from plasmodium falciparum | x-ray diffraction | A, B, C, D, E, F | — | — |
| 3KO3 | D-tyrosyl-tRNA(Tyr) deacylase from Plasmodium falciparum incomplex with ADP, obtained through… | x-ray diffraction | A, B, C, D, E, F | — | — |
| 3KO3 | D-tyrosyl-TRNA(TYR) deacylase from plasmodium falciparum incomplex with ADP, obtained through… | x-ray diffraction | A, B, C, D, E, F | — | — |
| 3KO4 | Crystal structure of D-Tyr-tRNA(Tyr) deacylase from Plasmodium falciparum in complex with ADP | x-ray diffraction | A, B, C, D, E, F | — | — |
| 3KO4 | Crystal structure of D-tyr-TRNA(TYR) deacylase from plasmodium falciparum in complex with ADP | x-ray diffraction | A, B, C, D, E, F | — | — |
| 3KO5 | D-Tyr-tRNA(Tyr) deacylase from Plasmodium falciparum in complex with ADP | x-ray diffraction | A, B, C, D, E, F | — | — |
| 3KO5 | D-tyr-TRNA(TYR) deacylase from plasmodium falciparum in complex with ADP | x-ray diffraction | A, B, C, D, E, F | — | — |
| 3KO7 | DTD from Plasmodium falciparum in complex with D-Lysine | x-ray diffraction | A, B, C, D, E, F | — | — |
| 3KO7 | Dtd from plasmodium falciparum in complex with D-lysine | x-ray diffraction | A, B, C, D, E, F | — | — |
| 3KO9 | DTD from Plasmodium falciparum in complex with D-Arginine | x-ray diffraction | A, B, C, D, E, F | — | — |
| 3KO9 | Dtd from plasmodium falciparum in complex with D-arginine | x-ray diffraction | A, B, C, D, E, F | — | — |
| 3KOB | DTD from Plasmodium falciparum in complex with D-Glutamic acid | x-ray diffraction | A, B, C, D, E, F | — | — |
| 3KOB | Dtd from plasmodium falciparum in complex with D-glutamic acid | x-ray diffraction | A, B, C, D, E, F | — | — |
| 3KOC | DTD from Plasmodium falciparum in complex with D-Histidine | x-ray diffraction | A, B, C, D, E, F | — | — |
| 3KOC | Dtd from plasmodium falciparum in complex with D-histidine | x-ray diffraction | A, B, C, D, E, F | — | — |
| 3KOD | DTD from Plasmodium falciparum in complex with D-Serine | x-ray diffraction | A, B, C, D, E, F | — | — |
| 3KOD | Dtd from plasmodium falciparum in complex with D-serine | x-ray diffraction | A, B, C, D, E, F | — | — |
| 3LMT | Crystal structure of DTD from Plasmodium falciparum | x-ray diffraction | A, B, C, D, E, F | — | — |
| 3LMT | Crystal structure of dtd from plasmodium falciparum | x-ray diffraction | A, B, C, D, E, F | — | — |
| 3LMU | Crystal structure of DTD from Plasmodium falciparum | x-ray diffraction | A, B, C, D, E, F, G, H | — | — |
| 3LMU | Crystal structure of dtd from plasmodium falciparum | x-ray diffraction | A, B, C, D, E, F, G, H | — | — |
| 3LMV | D-Tyr-tRNA(Tyr) Deacylase from plasmodium falciparum in complex with hepes | x-ray diffraction | A, B, C, D, E, F | — | — |
| 3LMV | D-tyr-TRNA(TYR) deacylase from plasmodium falciparum in complex with hepes | x-ray diffraction | A, B, C, D, E, F | — | — |
| 4NBI | D-aminoacyl-tRNA deacylase (DTD) from Plasmodium falciparum in complex with… | x-ray diffraction | A, B | — | — |
| 4NBI | D-aminoacyl-tRNA deacylase (dtd) from plasmodium falciparum in complex with… | x-ray diffraction | A, B | — | — |
| 4NBJ | D-aminoacyl-tRNA deacylase (DTD) from Plasmodium falciparum in complex with… | x-ray diffraction | A, B, C, D, E, F, G, H | — | — |
| 4NBJ | D-aminoacyl-tRNA deacylase (dtd) from plasmodium falciparum in complex with… | x-ray diffraction | A, B, C, D, E, F, G, H | — | — |
| 5J61 | D-aminoacyl-tRNA deacylase (DTD) from Plasmodium falciparum in complex with… | x-ray diffraction | A, B, C, D, E, F, G, H | A3G | 13 (best 0.81) |
| 5J61 | D-aminoacyl-tRNA deacylase (dtd) from plasmodium falciparum in complex with… | x-ray diffraction | A, B, C, D, E, F, G, H | — | — |
| Q8IIS0 | AlphaFold monomer V2.0 prediction for D-aminoacyl-tRNA deacylase (Q8IIS0) | predicted | A | — | — |
Ligands
- A3G · 3'-deoxy-3'-(glycylamino)adenosine · in 1 record
Experiment against prediction
- 5J61 chain E against the predicted model Q8IIS0: TM-score 0.99, RMSD 0.33 Å
- 3LMV chain F against the predicted model Q8IIS0: TM-score 0.99, RMSD 0.36 Å
- 3LMV chain F against the predicted model Q8IIS0: TM-score 0.99, RMSD 0.36 Å
- 5J61 chain G against the predicted model Q8IIS0: TM-score 0.99, RMSD 0.37 Å
- 3LMU chain F against the predicted model Q8IIS0: TM-score 0.99, RMSD 0.36 Å
- 3LMU chain F against the predicted model Q8IIS0: TM-score 0.99, RMSD 0.36 Å
- 3KO5 chain F against the predicted model Q8IIS0: TM-score 0.99, RMSD 0.40 Å
- 3KO5 chain F against the predicted model Q8IIS0: TM-score 0.99, RMSD 0.40 Å
- 5J61 chain H against the predicted model Q8IIS0: TM-score 0.99, RMSD 0.39 Å
- 3LMV chain E against the predicted model Q8IIS0: TM-score 0.99, RMSD 0.39 Å
Elsewhere
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