MolNFT v1 · #68841 · protein

Crystal structure of the third PDZ domain of psd-95

3K82 · Disks large homolog 4: “Crystal structure of the third PDZ domain of psd-95”. X-ray diffraction, 2 ligands (SNN, PO4). MolNFT v1 #68841 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 3K82
Type: protein
Length: 97 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Disks large homolog 4
UniProt: P78352
Ligands: SNN, PO4

Structure

x-ray diffraction · 1 distinct chain · 24% helix, 36% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Disks large homolog 4	protein	97	24% helix, 36% strand	P78352

Ligands and binding sites

SNN · L-3-aminosuccinimide · ligand · chains A
PO4 · Phosphate ion · ion · chains A
GOL · Glycerol · additive · chains A
EPE · 4-(2-hydroxyethyl)-1-piperazine ethanesulfonic acid · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 2 covalent (covalent ligand).

Compared structures

3K82 · Crystal Structure of the third PDZ domain of PSD-95 · the same entry in another collection · chain A against A, TM-score 1.00
P78352 · AlphaFold monomer V2.0 prediction for disks large homolog 4 (P78352) · a predicted model of the same protein · chain A against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P78352
Elsewhere: RCSB PDB 3K82 · PDBe 3K82 · UniProt P78352

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.